Forebrain neuroblast division

pathway activity — cross-omics
GO:0021873Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Forebrain neuroblast division pathway is significantly associated with the RNA expression of multiple genes, with the UCEC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MAN1A1, PNKD, and LEF1, each associated with the pathway in up to 3 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMAN1A1 →+0.542+0.324.007.00133
UCECPNKD →-0.466-0.332<.001<.00133
BRCALEF1 →+2.388+0.351.002.00333
UCECMIR6124 →-1.080-0.368.001.00733
CCRCCPPP1R15B →-1.063-0.523.002<.00133
LSCCUGT1A1 →+1.395+0.336<.001.00533
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration