CAMP-mediated signaling

pathway activity — cross-omics
GO:0019933Cross-omicsSHRNA → SHRNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the CAMP-mediated signaling pathway is significantly associated with the shRNA dependency of multiple genes, with the BREAST cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are TWIST1, PLAT, and RBL1, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BREASTTWIST1 →-0.253-0.808<.001<.00135
SKINPLAT →-0.167-0.677.001.00134
BONERBL1 →+0.362+1.351<.001.00534
LUNG_NSCLC_LUADLRP8 →-0.129-0.702.003.00334
LARGE_INTESTINEDZANK1 →-0.204-0.929.009.00134
BREASTBDH1 →-0.146-0.588.007.00634
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration