Negative regulation of smooth muscle cell migration

pathway activity — cross-omics
GO:0014912Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Negative regulation of smooth muscle cell migration pathway is significantly associated with the RNA expression of multiple genes, with the LARGE_INTESTINE cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are LASP1, LDLRAD2, and ENTR1, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of smooth muscle cell migration activity versus LASP1 in LARGE_INTESTINE (Pearson r = 0.46).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINELASP1 →+0.733+0.261.002<.00135
BREASTLDLRAD2 →+0.815+0.305.001.00235
LIVERENTR1 →-1.038-0.427.004.00235
PANCREASADAM9 →+1.425+0.283.009.00435
PANCREASWDR1 →+0.725+0.246<.001<.00135
BONESMARCC1 →-1.436-0.327<.001.00534
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0014912 vs LASP1 — LARGE_INTESTINE

Per-sample scatter of Negative regulation of smooth muscle cell migration activity vs LASP1 in LARGE_INTESTINE.

Explore this scatter interactively →

Exploration