Regulation of muscle hypertrophy

pathway activity — cross-omics
GO:0014743Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of muscle hypertrophy pathway is significantly associated with the protein abundance of multiple proteins, with the COAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are USP10_S365, RSU1, and TLN1_S1164, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of muscle hypertrophy activity versus USP10_S365 in COAD (Pearson r = -0.41).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADUSP10_S365 →-0.305-0.034.007<.00138
BRCARSU1 →+0.378+0.030<.001<.00136
LSCCTLN1_S1164 →+0.482+0.033.003.00336
BRCAVIM_S22 →+0.802+0.040<.001<.00136
BRCAVIM_S72 →+0.792+0.043<.001<.00136
COADCORO2B →+0.863+0.046.002.00527
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0014743 vs USP10_S365 — COAD

Per-sample scatter of Regulation of muscle hypertrophy activity vs USP10_S365 in COAD.

Explore this scatter interactively →

Exploration