Gamma-aminobutyric acid secretion

pathway activity — cross-omics
GO:0014051Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Gamma-aminobutyric acid secretion pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are ABAT, BLM, and APBA1, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVABAT →+0.907+0.766.003.00736
LUADBLM →-0.596-0.788.003.00335
UCECAPBA1 →+0.643+0.810<.001<.00134
GBMSPIN2B →+0.245+0.531.001.00434
CCRCCZNF793 →+0.596+0.608<.001.00334
COADZNF790 →+0.455+0.152.004.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration