Regulation of cardiac muscle contraction by calcium ion signaling

pathway activity — cross-omics
GO:0010882Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Regulation of cardiac muscle contraction by calcium ion signaling pathway is significantly associated with the RNA expression of multiple genes, with the LUNG_NSCLC_LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are ASPH, ADAM15, and ZCWPW1, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of cardiac muscle contraction by calcium ion signaling activity versus ASPH in LUNG_NSCLC_LUAD (Pearson r = 0.54).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADASPH →+1.277+0.163.004.00335
BLOOD_MyelomaADAM15 →+1.852+0.316<.001<.00134
LIVERZCWPW1 →-0.487-0.232.005.00434
SKINTRIM38 →+0.770+0.214.001<.00134
SKINMTMR6 →+0.947+0.214.001.00534
KIDNEYIRAK1 →+1.233+0.281.005<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0010882 vs ASPH — LUNG_NSCLC_LUAD

Per-sample scatter of Regulation of cardiac muscle contraction by calcium ion signaling activity vs ASPH in LUNG_NSCLC_LUAD.

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