Positive regulation of striated muscle cell apoptotic process

pathway activity — cross-omics
GO:0010663Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of striated muscle cell apoptotic process pathway is significantly associated with the protein abundance of multiple proteins, with the PDAC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are SSH1_S1042, SIPA1_S74, and BNIP3, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of striated muscle cell apoptotic process activity versus SSH1_S1042 in PDAC (Pearson r = -0.04).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PDACSSH1_S1042 →-0.470-0.049<.001.00136
GBMSIPA1_S74 →-0.533-0.072.003.00335
CCRCCBNIP3 →+0.572+0.062<.001<.00134
LSCCMAP1A →+0.296+0.051.004<.00134
LSCCMAP2 →+0.672+0.072.001.00134
LSCCNEDD4L →+0.549+0.072<.001.00334
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0010663 vs SSH1_S1042 — PDAC

Per-sample scatter of Positive regulation of striated muscle cell apoptotic process activity vs SSH1_S1042 in PDAC.

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Exploration