Exit from mitosis

pathway activity — cross-omics
GO:0010458Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Exit from mitosis pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are SMARCD1, DNMT1, and DHX8, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Exit from mitosis activity versus SMARCD1 in GBM (Pearson r = 0.44).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMSMARCD1 →+0.300+0.039<.001<.00137
LUADDNMT1 →+0.179+0.040.006<.00137
HNSCDHX8 →+0.201+0.090.003.00137
GBMTOP2A →+0.984+0.068<.001<.00136
LUADBRCA1_S114 →+0.848+0.062.001<.00136
UCECDNMT3A →+0.501+0.054<.001.00536
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0010458 vs SMARCD1 — GBM

Per-sample scatter of Exit from mitosis activity vs SMARCD1 in GBM.

Explore this scatter interactively →

Exploration