Bile acid metabolic process

Across TCGA patient cohorts, RNA activity of the Bile acid metabolic process pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are FUT2, ZNF611, and HMGB1P23, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Bile acid metabolic process activity versus FUT2 in OV (Pearson r = 0.42).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	FUT2 →	+0.995	+0.185	<.001	<.001	3	4
GBM	ZNF611 →	+0.234	+0.157	.002	<.001	3	4
GBM	HMGB1P23 →	+0.555	+0.237	<.001	<.001	3	4
UCEC	MUC6 →	+2.232	+0.321	<.001	<.001	3	4
LSCC	MFSD13B →	+0.348	+0.133	<.001	.002	3	4
CCRCC	CCL2 →	-0.954	-0.189	<.001	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0008206 vs FUT2 — OV

Explore this scatter interactively →