Digestion

pathway activity — cross-omics
GO:0007586Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Digestion pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are SLC44A4, ACRV1, and DDIAS, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Digestion activity versus SLC44A4 in BRCA (Pearson r = 0.35).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCASLC44A4 →+2.242+0.184<.001<.00136
BRCAACRV1 →-0.407-0.328<.001<.00136
BRCADDIAS →-0.624-0.225.002<.00136
BRCAFAM72B →-0.545-0.156<.001<.00136
UCECBUB1 →-0.797-0.187.009<.00135
BRCAAGR3 →+2.855+0.213<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0007586 vs SLC44A4 — BRCA

Per-sample scatter of Digestion activity vs SLC44A4 in BRCA.

Explore this scatter interactively →

Exploration