Osmosensory signaling pathway

pathway activity — cross-omics
GO:0007231Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Osmosensory signaling pathway pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CD69, FRMD3, and RPL37AP8, each associated with the pathway in up to 3 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Osmosensory signaling pathway activity versus CD69 in OV (Pearson r = 0.27).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVCD69 →+0.957+0.151.001.00933
PDACFRMD3 →-0.418-0.104.004.00433
PDACRPL37AP8 →-0.353-0.074.002.00433
GBMUNC45B →-0.045-0.240.002.00333
GBMHMGA1P4 →-0.516-0.330.001.00133
COADC1DP5 →-0.350-0.104<.001.00233
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0007231 vs CD69 — OV

Per-sample scatter of Osmosensory signaling pathway activity vs CD69 in OV.

Explore this scatter interactively →

Exploration