Regulation of the force of heart contraction by chemical signal

pathway activity — cross-omics
GO:0003057Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of the force of heart contraction by chemical signal pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are S1PR1, CXCR2, and FCAR, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAS1PR1 →+0.618+0.271.006.00634
LSCCCXCR2 →+0.847+0.212<.001<.00134
LSCCFCAR →+0.490+0.176<.001<.00134
LSCCGIMAP5 →+0.572+0.161<.001<.00134
BRCACASP4LP →+0.408+0.274.002<.00134
GBMNOD1 →+0.422+0.427.001.00534
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration