Regulation of the force of heart contraction by chemical signal

pathway activity & survival
GO:0003057SurvivalRNA activityKaplan–Meier · TCGA cohorts

Across TCGA pan-cancer cohorts, RNA activity of the Regulation of the force of heart contraction by chemical signal pathway is associated with patient survival in 23 of 34 cancer lineages. Pathway activity is summarized from the expression of its 6 member genes.

The strongest signal is observed in colon adenocarcinoma (COAD), where higher Regulation of the force of heart contraction by chemical signal pathway activity is associated with poorer disease-free survival. In most high-consensus cancer types, elevated pathway activity shows an unfavorable survival association, although some cancer types, such as SKCM and LAML, show the opposite pattern, with higher activity associated with better survival.

COAD, KICH, and SKCM are the cancer lineages in which this pathway most reproducibly stratifies patient survival.

Pathway-activity survival associations by lineage

Ranked by sampling consensus. AUC1 and AUC2 represent the survival AUCs for the high- and low-pathway-activity groups, respectively. The group with the lower AUC is interpreted as having poorer survival. The reported p-values are derived from the log-rank test.
LineageMeasureSplitStageAUC1
high
AUC2
low
pSampling consensus
COADDFSMedianII,III,IV0.3980.569<.001106view →
KICHOSMedianIII,IV0.7211.000<.00156view →
SKCMDFSTertileAll0.6800.563.01331view →
LAMLDFSMedianAll0.5070.255<.00130view →
SCLCOSQuartileAll0.3040.728<.00130view →
MESODFSTertileII,III,IV0.7440.129.00127view →
UVMDFSMedianII,III,IV0.7180.377.00525view →
GBMDFSTertileAll0.1570.390<.00121view →
THCADFSMedianII,III,IV0.7870.938.00319view →
UCSDFSMedianIV0.8850.440.01518view →
ESCAOSMedianIV0.6980.222.00618view →
CESCOSQuartileIII,IV0.6370.897.02310view →
Pink = unfavorable, green = favorable. Showing the 12 strongest of 23 lineages.

Exploration