Cytoplasmic pattern recognition receptor signaling pathway

Across TCGA patient cohorts, RNA activity of the Cytoplasmic pattern recognition receptor signaling pathway pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CLEC7A, MIR155HG, and RIPK2, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Cytoplasmic pattern recognition receptor signaling pathway activity versus CLEC7A in LUAD (Pearson r = 0.17).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUAD	CLEC7A →	+0.945	+0.316	<.001	<.001	3	6
BRCA	MIR155HG →	+0.696	+0.166	<.001	<.001	3	6
CCRCC	RIPK2 →	+0.555	+0.204	<.001	<.001	3	6
OV	SLC15A3 →	+0.966	+0.151	<.001	.002	3	5
LUAD	SAMD9L →	+0.944	+0.211	<.001	<.001	3	5
CCRCC	CLEC6A →	+0.511	+0.213	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0002753 vs CLEC7A — LUAD

Explore this scatter interactively →