Osteoclast proliferation

pathway activity — cross-omics
GO:0002158Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Osteoclast proliferation pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are LOXL2, VENTX, and C1orf21, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMLOXL2 →+1.106+0.548<.001<.00135
GBMVENTX →+1.035+0.544<.001.00135
CCRCCC1orf21 →-0.754-0.520<.001<.00134
GBMADAMTS12 →+0.849+0.371<.001.00134
GBMCOL3A1 →+2.079+0.617<.001<.00134
GBMTGFBI →+1.319+0.418<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration