Columnar/cuboidal epithelial cell maturation

pathway activity — cross-omics
GO:0002069Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Columnar/cuboidal epithelial cell maturation pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are RRM1, MYOZ1, and MIR6783, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMRRM1 →+0.492+0.846<.001<.00135
PDACMYOZ1 →-0.513-0.421.001<.00135
COADMIR6783 →+0.380+0.178.006.00434
LUADSNRPB →+0.394+0.266.003.00434
GBMYBX1 →+0.401+0.516<.001<.00134
LUADNCAPD2 →+0.525+0.293<.001.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

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