Tissue homeostasis

pathway activity — cross-omics
GO:0001894Cross-omicsPROTEIN-MS → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Tissue homeostasis pathway is significantly associated with the immune infiltration of multiple features, with the COAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated features across cancer lineages are GMP, each associated with the pathway in up to 1 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, GMP grouped by Tissue homeostasis-low versus -high activity in COAD.

Pathway-associated features by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner featureX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADGMP →+0.163+0.270.003.04321
Each partner links to its Q-omics profile. Showing the 1 strongest associations by consensus.

GMP by Tissue homeostasis activity — COAD

Box plot of GMP in Tissue homeostasis-low vs -high samples in COAD.

Explore this box plot interactively →

Exploration