Regulation of glutamine family amino acid metabolic process

pathway activity — cross-omics
GO:0000820Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of glutamine family amino acid metabolic process pathway is significantly associated with the RNA expression of multiple genes, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are PARPBP, HOXC9, and CEP128, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPARPBP →-0.568-0.447<.001.00234
UCECHOXC9 →-0.809-0.575.009.00134
GBMCEP128 →-0.455-0.490.003.00524
CCRCCSLC25A6P4 →-0.367-0.673<.001<.00133
BRCAHOXC11 →-1.181-0.597.005.00233
PDACSPATS2 →-0.365-0.538<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration