Mitotic spindle elongation

pathway activity — cross-omics
GO:0000022Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Mitotic spindle elongation pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are GINS1, CEP152, and FBXO5, each associated with the pathway in up to 9 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Mitotic spindle elongation activity versus GINS1 in BRCA (Pearson r = 0.60).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAGINS1 →+0.952+0.508<.001<.00139
OVCEP152 →+0.738+0.501.001.00239
BRCAFBXO5 →+0.912+0.566<.001<.00139
BRCALMNB1 →+0.964+0.624<.001<.00139
BRCAKIF14 →+1.198+0.613<.001<.00139
BRCANCAPH →+1.034+0.618<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0000022 vs GINS1 — BRCA

Per-sample scatter of Mitotic spindle elongation activity vs GINS1 in BRCA.

Explore this scatter interactively →

Exploration