ZSWIM9

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ZSWIM9 mutation is significantly associated with the RNA expression of many other genes, with 777 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ZSWIM9-associated genes across cancer lineages are ASB17, SLC4A1, and DCAF12L1. Each is linked with ZSWIM9 in more than 1 cancer types. Because this analysis shows association rather than direction, both ZSWIM9-to-partner and partner-to-ZSWIM9 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZSWIM9→partner) and Y-score (partner→ZSWIM9) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYASB17 →+0.017+4.807<.001.00332
SKINSLC4A1 →+0.296+3.938<.001.00531
BLOOD_LymphomaDCAF12L1 →+0.012+4.867<.001.00931
BLOOD_LeukemiaANKRD66 →+0.241+4.922<.001.00931
LARGE_INTESTINEPES1 →+0.460+2.800.006.00131
LARGE_INTESTINEANKRD54 →+0.479+2.714.002.00231
Each partner links to its Q-omics profile. Showing the 6 strongest of 777 associations by consensus.

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