ZNRF4

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ZNRF4 mutation is significantly associated with the RNA expression of many other genes, with 17 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible ZNRF4-associated genes across cancer lineages are VCY, DEFB118, and IL25. Each is linked with ZNRF4 in more than 1 cancer types. Because this analysis shows association rather than direction, both ZNRF4-to-partner and partner-to-ZNRF4 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, VCY grouped by ZNRF4-low versus ZNRF4-high in BREAST.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZNRF4→partner) and Y-score (partner→ZNRF4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BREASTVCY →+0.722+3.672<.001.00631
BREASTDEFB118 →+0.026+4.196<.001.00631
BREASTIL25 →+0.023+3.672<.001.00631
BREASTTGM6 →+0.021+4.312<.001.00131
BREASTOR52A1 →+0.025+5.087<.001<.00131
SKINKRTAP4-6 →+0.049+5.415<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 17 associations by consensus.

VCY by ZNRF4 expression — BREAST

Box plot of VCY in ZNRF4-low vs ZNRF4-high samples in BREAST.

Explore this box plot interactively →

Exploration