ZNF644

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ZNF644 mutation is significantly associated with the RNA expression of many other genes, with 162 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ZNF644-associated genes across cancer lineages are TMEM215, KRTAP4-4, and PRB1. Each is linked with ZNF644 in more than 1 cancer types. Because this analysis shows association rather than direction, both ZNF644-to-partner and partner-to-ZNF644 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, TMEM215 grouped by ZNF644-low versus ZNF644-high in PANCREAS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZNF644→partner) and Y-score (partner→ZNF644) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASTMEM215 →+0.244+4.786<.001.00132
BLOOD_LymphomaKRTAP4-4 →+0.016+4.643<.001.00532
BLOOD_LymphomaPRB1 →+0.052+4.350<.001.00532
LARGE_INTESTINERSPH6A →+0.085+3.051.005<.00132
CNSOR52K2 →+0.065+3.772<.001.00832
CNSKRT77 →+0.034+3.981<.001<.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 162 associations by consensus.

TMEM215 by ZNF644 expression — PANCREAS

Box plot of TMEM215 in ZNF644-low vs ZNF644-high samples in PANCREAS.

Explore this box plot interactively →

Exploration