ZNF496

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ZNF496 mutation is significantly associated with the RNA expression of many other genes, with 125 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ZNF496-associated genes across cancer lineages are KRTAP4-8, SLC25A35, and SCO1. Each is linked with ZNF496 in more than 1 cancer types. Because this analysis shows association rather than direction, both ZNF496-to-partner and partner-to-ZNF496 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, KRTAP4-8 grouped by ZNF496-low versus ZNF496-high in SOFT_TISSUE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZNF496→partner) and Y-score (partner→ZNF496) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
SOFT_TISSUEKRTAP4-8 →+0.287+3.736.005.00832
LARGE_INTESTINESLC25A35 →+0.854+3.364<.001.00232
LARGE_INTESTINESCO1 →+0.614+3.364.003.00232
LUNG_NSCLC_LUADUGT2B4 →+1.140+3.544<.001.00732
UPPER_AERODIGESTIVE_TRACTCT45A7 →+0.052+4.209<.001.00631
BLOOD_LeukemiaHRG →+0.307+3.177<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 125 associations by consensus.

KRTAP4-8 by ZNF496 expression — SOFT_TISSUE

Box plot of KRTAP4-8 in ZNF496-low vs ZNF496-high samples in SOFT_TISSUE.

Explore this box plot interactively →

Exploration