ZNF3

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ZNF3 mutation is significantly associated with the RNA expression of many other genes, with 19 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible ZNF3-associated genes across cancer lineages are OR14A16, KRTAP4-11, and GML. Each is linked with ZNF3 in more than 1 cancer types. Because this analysis shows association rather than direction, both ZNF3-to-partner and partner-to-ZNF3 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, OR14A16 grouped by ZNF3-low versus ZNF3-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZNF3→partner) and Y-score (partner→ZNF3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaOR14A16 →+0.016+5.643<.001.00231
BLOOD_LymphomaKRTAP4-11 →+0.038+5.209<.001.00531
BLOOD_LeukemiaGML →+0.080+4.152<.001.00931
BLOOD_LeukemiaGNGT1 →+0.050+4.551.002.00431
BLOOD_LeukemiaTACR3 →+0.038+5.060<.001.00131
BLOOD_LeukemiaNKX2-6 →+0.489+5.786<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 19 associations by consensus.

OR14A16 by ZNF3 expression — BLOOD_Lymphoma

Box plot of OR14A16 in ZNF3-low vs ZNF3-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration