ZNF235

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, ZNF235 mutation is significantly associated with the RNA expression of many other genes, with 7 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible ZNF235-associated genes across cancer lineages are PRAC1, GJD2, and C1QB. Each is linked with ZNF235 in more than 1 cancer types. Because this analysis shows association rather than direction, both ZNF235-to-partner and partner-to-ZNF235 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PRAC1 grouped by ZNF235-low versus ZNF235-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ZNF235→partner) and Y-score (partner→ZNF235) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINEPRAC1 →+2.879+3.556.002.00731
LARGE_INTESTINEGJD2 →+0.002+3.700<.001.00931
LARGE_INTESTINEC1QB →+0.092+2.994<.001.00631
LARGE_INTESTINEOR10Q1 →+0.082+3.242.005.00331
BLOOD_LeukemiaSOX14 →+0.003+3.269<.001.00731
BLOOD_LeukemiaDNER →+0.098+3.345<.001.00931
Each partner links to its Q-omics profile. Showing the 6 strongest of 7 associations by consensus.

PRAC1 by ZNF235 expression — LARGE_INTESTINE

Box plot of PRAC1 in ZNF235-low vs ZNF235-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration