YRDC

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, YRDC mutation is significantly associated with the RNA expression of many other genes, with 75 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible YRDC-associated genes across cancer lineages are ECM1P1, RN7SKP290, and CYP4F36P. Each is linked with YRDC in more than 1 cancer types. Because this analysis shows association rather than direction, both YRDC-to-partner and partner-to-YRDC results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (YRDC→partner) and Y-score (partner→YRDC) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECECM1P1 →+0.152+3.091<.001.00331
UCECRN7SKP290 →+0.301+3.621.001.00431
UCECCYP4F36P →+0.379+3.105.003.00531
UCECMIR6766 →+0.516+3.621<.001.00431
HNSCRNU6-956P →+0.366+7.954<.001.00831
UCECH3P46 →+0.142+4.292<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 75 associations by consensus.

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