YIPF5

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, YIPF5 mutation is significantly associated with the RNA expression of many other genes, with 968 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible YIPF5-associated genes across cancer lineages are RNA5SP412, MIR6803, and SPCS2P2. Each is linked with YIPF5 in more than 1 cancer types. Because this analysis shows association rather than direction, both YIPF5-to-partner and partner-to-YIPF5 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RNA5SP412 grouped by YIPF5-low versus YIPF5-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (YIPF5→partner) and Y-score (partner→YIPF5) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECRNA5SP412 →+0.599+2.774<.001<.00132
UCECMIR6803 →+0.183+4.777<.001.00232
UCECSPCS2P2 →+0.065+2.476<.001.00931
UCECIRF2-DT →-0.523-3.785<.001<.00131
UCECSNX29P2 →+0.068+2.181.005.00431
UCECRBAK-RBAKDN →+0.124+2.727<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 968 associations by consensus.

RNA5SP412 by YIPF5 expression — UCEC

Box plot of RNA5SP412 in YIPF5-low vs YIPF5-high samples in UCEC.

Explore this box plot interactively →

Exploration