XYLB

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, XYLB protein abundance is significantly associated with the RNA expression of many other genes, with 2,649 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible XYLB-associated genes across cancer lineages are TCAF1, CDHR2, and SLC30A5. Each is linked with XYLB in more than 4 cancer types. Because this analysis shows association rather than direction, both XYLB-to-partner and partner-to-XYLB results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, XYLB versus TCAF1 in BLOOD_Leukemia, with a Pearson correlation of 0.33.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (XYLB→partner) and Y-score (partner→XYLB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaTCAF1 →+1.104+0.444.001<.00135
LIVERCDHR2 →+2.004+0.512.005.00934
URINARY_TRACTSLC30A5 →+0.722+0.668<.001<.00134
URINARY_TRACTASTE1 →+0.492+0.629.009.00234
LUNG_SCLCKLF13 →+0.976+0.633<.001<.00134
BLOOD_LymphomaFAF2 →+0.916+0.658<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 2,649 associations by consensus.

XYLB vs TCAF1 — BLOOD_Leukemia

Per-sample scatter of XYLB vs TCAF1 in BLOOD_Leukemia (Pearson r = 0.33).

Explore this scatter interactively →

Exploration