XYLB

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, XYLB mutation is significantly associated with the RNA expression of many other genes, with 112 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible XYLB-associated genes across cancer lineages are FABP9, ACOT6, and DBX2. Each is linked with XYLB in more than 2 cancer types. Because this analysis shows association rather than direction, both XYLB-to-partner and partner-to-XYLB results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, FABP9 grouped by XYLB-low versus XYLB-high in BLOOD_Lymphoma.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (XYLB→partner) and Y-score (partner→XYLB) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaFABP9 →+0.382+5.247<.001.00131
BLOOD_LymphomaACOT6 →+0.047+4.523<.001.00431
LUNG_NSCLC_LUADDBX2 →+0.014+4.857.002.00913
SKINOR1E3 →+0.036+6.022<.001.00131
SKINOR1L3 →+0.019+5.415<.001.00431
SKINSPINK9 →+0.058+5.415<.001.00431
Each partner links to its Q-omics profile. Showing the 6 strongest of 112 associations by consensus.

FABP9 by XYLB expression — BLOOD_Lymphoma

Box plot of FABP9 in XYLB-low vs XYLB-high samples in BLOOD_Lymphoma.

Explore this box plot interactively →

Exploration