XPO4

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, XPO4 protein abundance is significantly associated with the RNA expression of many other genes, with 4,861 significant associations in total. LUAD shows the largest number of these associations.

The most reproducible XPO4-associated genes across cancer lineages are MIPEP, MICU2, and SUPT20H. Each is linked with XPO4 in more than 7 cancer types. Because this analysis shows association rather than direction, both XPO4-to-partner and partner-to-XPO4 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, XPO4 versus MIPEP in HNSC, with a Pearson correlation of 0.34.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (XPO4→partner) and Y-score (partner→XPO4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCMIPEP →+0.621+0.240.002<.00138
OVMICU2 →+0.435+0.182<.001<.00136
HNSCSUPT20H →+0.525+0.194.009.00126
LSCCMTRF1 →+0.466+0.177<.001.00135
HNSCALG5 →+0.536+0.180<.001<.00135
HNSCEXOSC8 →+0.623+0.265<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 4,861 associations by consensus.

XPO4 vs MIPEP — HNSC

Per-sample scatter of XPO4 vs MIPEP in HNSC (Pearson r = 0.34).

Explore this scatter interactively →

Exploration