WDCP

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, WDCP protein abundance is significantly associated with the RNA expression of many other genes, with 8,545 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible WDCP-associated genes across cancer lineages are CENPA, CENPO, and RRM2. Each is linked with WDCP in more than 5 cancer types. Because this analysis shows association rather than direction, both WDCP-to-partner and partner-to-WDCP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, WDCP versus CENPA in GBM, with a Pearson correlation of 0.49.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (WDCP→partner) and Y-score (partner→WDCP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMCENPA →+0.933+0.342<.001<.00136
HNSCCENPO →+0.715+0.539<.001<.00136
GBMRRM2 →+1.057+0.358<.001<.00136
UCECPRR11 →+0.856+0.313.003<.00136
GBMTRIP13 →+0.908+0.381<.001<.00136
GBMGINS1 →+0.797+0.285<.001.00235
Each partner links to its Q-omics profile. Showing the 6 strongest of 8,545 associations by consensus.

WDCP vs CENPA — GBM

Per-sample scatter of WDCP vs CENPA in GBM (Pearson r = 0.49).

Explore this scatter interactively →

Exploration