WASHC3

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, WASHC3 protein abundance is significantly associated with the RNA expression of many other genes, with 14,142 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible WASHC3-associated genes across cancer lineages are DTL, CD4, and SMC4. Each is linked with WASHC3 in more than 5 cancer types. Because this analysis shows association rather than direction, both WASHC3-to-partner and partner-to-WASHC3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, WASHC3 versus DTL in LSCC, with a Pearson correlation of -0.44.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (WASHC3→partner) and Y-score (partner→WASHC3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCDTL →-1.094-0.198<.001.00236
OVCD4 →+1.008+0.361<.001<.00135
LSCCSMC4 →-1.107-0.262<.001<.00135
HNSCHELLS →-0.831-0.206<.001<.00135
HNSCEXO1 →-1.131-0.238<.001<.00135
HNSCATAD5 →-1.037-0.222<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,142 associations by consensus.

WASHC3 vs DTL — LSCC

Per-sample scatter of WASHC3 vs DTL in LSCC (Pearson r = -0.44).

Explore this scatter interactively →

Exploration