VXN

mutation — cross-omics
Cross-omicsMUTATION → PROTEIN-RPPAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, VXN mutation is significantly associated with the total protein of many other genes, with 6 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible VXN-associated genes across cancer lineages are ASNS, ERK2, and Myosin-IIa_pS1943. Each is linked with VXN in more than 1 cancer types. Because this analysis shows association rather than direction, both VXN-to-partner and partner-to-VXN results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, ASNS grouped by VXN-low versus VXN-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (VXN→partner) and Y-score (partner→VXN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECASNS →+0.662+3.321<.001.00932
UCECERK2 →+0.184+2.000.034.03231
UCECMyosin-IIa_pS1943 →+0.189+2.013.042.01831
UCECPDCD4 →-0.439-2.700.038.00631
UCEC4E-BP1_pT37_T46 →-0.362-2.700.032.00631
UCECPDK1_pS241 →+0.236+2.713.002.00311
Each partner links to its Q-omics profile. Showing the 6 strongest of 6 associations by consensus.

ASNS by VXN expression — UCEC

Box plot of ASNS in VXN-low vs VXN-high samples in UCEC.

Explore this box plot interactively →

Exploration