VXN

RNA expression — cross-omics
Cross-omicsRNA → FUNCTION-RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, VXN RNA expression is significantly associated with the go_rna of many other GO terms, with 3,497 significant associations in total. SKIN shows the largest number of these associations.

The most reproducible VXN-associated GO terms across cancer lineages are PML body organization, Terpenoid catabolic process, and Leukotriene catabolic process. Each is linked with VXN in more than 9 cancer types. Because this analysis shows association rather than direction, both VXN-to-partner and partner-to-VXN results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, PML body organization grouped by VXN-low versus VXN-high in LUNG_NSCLC_LUSC.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (VXN→partner) and Y-score (partner→VXN) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner GO termX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUSCPML body organization →+0.194+0.455<.001.003310
LUNG_NSCLC_LUSCTerpenoid catabolic process →-1.534-0.637<.001.00539
LUNG_NSCLC_LUSCLeukotriene catabolic process →-1.871-0.661<.001.00439
BONERegulation of hippo signaling →+0.078+0.551.002<.00139
LUNG_NSCLC_LUSCIsoprenoid catabolic process →-1.553-0.637<.001.00539
LIVERNegative regulation of dendritic cell apoptotic process →+1.605+0.790.001.00539
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,497 associations by consensus.

PML body organization by VXN expression — LUNG_NSCLC_LUSC

Box plot of PML body organization in VXN-low vs VXN-high samples in LUNG_NSCLC_LUSC.

Explore this box plot interactively →

Exploration