VWA3B

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, VWA3B mutation is significantly associated with the RNA expression of many other genes, with 5,198 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible VWA3B-associated genes across cancer lineages are CDCA8, TCF19, and KIF23. Each is linked with VWA3B in more than 4 cancer types. Because this analysis shows association rather than direction, both VWA3B-to-partner and partner-to-VWA3B results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CDCA8 grouped by VWA3B-low versus VWA3B-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (VWA3B→partner) and Y-score (partner→VWA3B) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCDCA8 →+0.546+2.364<.001<.00135
UCECTCF19 →+0.604+1.490<.001<.00135
UCECKIF23 →+0.517+2.147<.001<.00135
UCECCENPU →+0.627+1.820<.001<.00134
UCECSAR1B →+0.368+1.624<.001<.00134
STADSMIM12 →+0.304+3.233.008.00834
Each partner links to its Q-omics profile. Showing the 6 strongest of 5,198 associations by consensus.

CDCA8 by VWA3B expression — UCEC

Box plot of CDCA8 in VWA3B-low vs VWA3B-high samples in UCEC.

Explore this box plot interactively →

Exploration