VTRNA2-2P

Across TCGA patient cohorts, VTRNA2-2P RNA expression is significantly associated with the go_rna of many other GO terms, with 6,370 significant associations in total. STAD shows the largest number of these associations.

The most reproducible VTRNA2-2P-associated GO terms across cancer lineages are Positive regulation of DNA metabolic process, Peptidyl-lysine modification, and Regulation of telomere maintenance in response to DNA damage. Each is linked with VTRNA2-2P in more than 9 cancer types. Because this analysis shows association rather than direction, both VTRNA2-2P-to-partner and partner-to-VTRNA2-2P results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Positive regulation of DNA metabolic process grouped by VTRNA2-2P-low versus VTRNA2-2P-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (VTRNA2-2P→partner) and Y-score (partner→VTRNA2-2P) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Positive regulation of DNA metabolic process →	+0.058	+0.564	<.001	<.001	3	10
STAD	Peptidyl-lysine modification →	+0.058	+0.630	<.001	<.001	3	10
STAD	Regulation of telomere maintenance in response to DNA damage →	+0.045	+0.552	<.001	<.001	3	9
ESCA	Positive regulation of signal transduction by p53 class mediator →	+0.058	+0.555	<.001	<.001	3	9
STAD	tRNA metabolic process →	+0.060	+0.571	<.001	<.001	3	9
STAD	tRNA processing →	+0.059	+0.525	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 6,370 associations by consensus.

Positive regulation of DNA metabolic process by VTRNA2-2P expression — STAD

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