VTCN1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, VTCN1 RNA expression is significantly associated with the protein abundance of many other proteins, with 9,315 significant associations in total. PDAC shows the largest number of these associations.

The most reproducible VTCN1-associated proteins across cancer lineages are CDH1, DHRS3, and VIM_S226. Each is linked with VTCN1 in more than 3 cancer types. Because this analysis shows association rather than direction, both VTCN1-to-partner and partner-to-VTCN1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, VTCN1 versus CDH1 in OV, with a Pearson correlation of 0.49.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (VTCN1→partner) and Y-score (partner→VTCN1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVCDH1 →+0.687+2.503<.001<.00134
OVDHRS3 →+0.678+2.440<.001<.00134
PDACVIM_S226 →-1.075-0.764<.001.00933
BRCAMID1 →+0.453+1.916.003<.00133
HNSCARFGEF3 →+0.476+1.365.002.00233
CCRCCMMP7 →+0.940+0.553<.001<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 9,315 associations by consensus.

VTCN1 vs CDH1 — OV

Per-sample scatter of VTCN1 vs CDH1 in OV (Pearson r = 0.49).

Explore this scatter interactively →

Exploration