VSX1

Across TCGA patient cohorts, VSX1 protein abundance is significantly associated with the RNA expression of many other genes, with 16,922 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible VSX1-associated genes across cancer lineages are RHOH, SP140, and CYTIP. Each is linked with VSX1 in more than 9 cancer types. Because this analysis shows association rather than direction, both VSX1-to-partner and partner-to-VSX1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, VSX1 versus RHOH in LSCC, with a Pearson correlation of 0.71.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (VSX1→partner) and Y-score (partner→VSX1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LSCC	RHOH →	+0.970	+1.008	<.001	<.001	3	10
LSCC	SP140 →	+0.973	+1.018	<.001	<.001	3	10
HNSC	CYTIP →	+1.362	+0.978	<.001	<.001	3	9
LSCC	S1PR4 →	+0.884	+0.984	<.001	<.001	3	9
HNSC	JAML →	+1.164	+0.773	<.001	<.001	3	9
LSCC	TAGAP →	+0.951	+0.993	<.001	<.001	3	9

Each partner links to its Q-omics profile. Showing the 6 strongest of 16,922 associations by consensus.

VSX1 vs RHOH — LSCC

Explore this scatter interactively →