Across TCGA patient cohorts, VSTM1 RNA expression is significantly associated with the protein abundance of many other proteins, with 7,126 significant associations in total. GBM shows the largest number of these associations.

The most reproducible VSTM1-associated proteins across cancer lineages are LSP1, DOK3, and LCP2. Each is linked with VSTM1 in more than 5 cancer types. Because this analysis shows association rather than direction, both VSTM1-to-partner and partner-to-VSTM1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (VSTM1→partner) and Y-score (partner→VSTM1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
HNSC	LSP1 →	+0.487	+0.519	<.001	.002	3	6
GBM	DOK3 →	+0.436	+0.481	.001	.002	3	5
HNSC	LCP2 →	+0.424	+0.544	<.001	.001	3	5
LSCC	PLEKHO2 →	+0.360	+0.436	<.001	<.001	3	5
LSCC	PARVG →	+0.559	+0.415	<.001	<.001	3	5
LSCC	CLC →	+0.755	+0.487	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 7,126 associations by consensus.

Exploration

VSTM1 survival (RNA) · tumor vs normal (RNA) · all VSTM1 data types