VPS9D1-AS1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, VPS9D1-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 10,668 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible VPS9D1-AS1-associated proteins across cancer lineages are NOL10, UTP15, and HEATR1. Each is linked with VPS9D1-AS1 in more than 4 cancer types. Because this analysis shows association rather than direction, both VPS9D1-AS1-to-partner and partner-to-VPS9D1-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, VPS9D1-AS1 versus NOL10 in BRCA, with a Pearson correlation of 0.39.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (VPS9D1-AS1→partner) and Y-score (partner→VPS9D1-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCANOL10 →+0.457+0.961<.001.00135
BRCAUTP15 →+0.345+0.948<.001<.00135
LSCCHEATR1 →+0.339+0.520<.001<.00135
LSCCUTP4 →+0.353+0.525<.001<.00135
BRCASF3B3 →+0.257+1.152<.001<.00135
BRCANUP93 →+0.224+0.833<.001.00434
Each partner links to its Q-omics profile. Showing the 6 strongest of 10,668 associations by consensus.

VPS9D1-AS1 vs NOL10 — BRCA

Per-sample scatter of VPS9D1-AS1 vs NOL10 in BRCA (Pearson r = 0.39).

Explore this scatter interactively →

Exploration