VPREB1

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, VPREB1 protein abundance is significantly associated with the RNA expression of many other genes, with 70 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible VPREB1-associated genes across cancer lineages are IGDCC4, CEP126, and RBPJL. Each is linked with VPREB1 in more than 1 cancer types. Because this analysis shows association rather than direction, both VPREB1-to-partner and partner-to-VPREB1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, VPREB1 versus IGDCC4 in BLOOD_Leukemia, with a Pearson correlation of -0.66.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (VPREB1→partner) and Y-score (partner→VPREB1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaIGDCC4 →-0.118-2.248.005.00331
BLOOD_LeukemiaCEP126 →-1.696-3.144<.001.00931
BLOOD_LeukemiaRBPJL →-0.250-2.915.003.00331
BLOOD_LeukemiaKRT17 →-0.728-2.120.001.00631
BLOOD_LeukemiaDDC →-0.580-3.167<.001.00931
BLOOD_LeukemiaCGA →-0.108-2.120<.001.00631
Each partner links to its Q-omics profile. Showing the 6 strongest of 70 associations by consensus.

VPREB1 vs IGDCC4 — BLOOD_Leukemia

Per-sample scatter of VPREB1 vs IGDCC4 in BLOOD_Leukemia (Pearson r = -0.66).

Explore this scatter interactively →

Exploration