VN1R4

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, VN1R4 mutation is significantly associated with the RNA expression of many other genes, with 21 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible VN1R4-associated genes across cancer lineages are SLC15A5, CBLIF, and ARHGAP36. Each is linked with VN1R4 in more than 1 cancer types. Because this analysis shows association rather than direction, both VN1R4-to-partner and partner-to-VN1R4 results are reported.

Each partner links to its own Q-omics profile.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (VN1R4→partner) and Y-score (partner→VN1R4) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaSLC15A5 →+0.029+5.643<.001.00231
BLOOD_LeukemiaCBLIF →+0.109+3.769<.001.00831
BLOOD_LeukemiaARHGAP36 →+0.016+3.944<.001.00631
BLOOD_LeukemiaC11orf53 →+0.029+3.551<.001.00931
BLOOD_LeukemiaIL3 →+0.058+4.786<.001<.00131
BLOOD_LeukemiaMAGEB10 →+0.183+3.874<.001.00531
Each partner links to its Q-omics profile. Showing the 6 strongest of 21 associations by consensus.

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