VMP1

Across TCGA cell cohorts, VMP1 protein abundance is significantly associated with the RNA expression of many other genes, with 4,175 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible VMP1-associated genes across cancer lineages are HSD17B4, SLC35A2, and TIGD2. Each is linked with VMP1 in more than 12 cancer types. Because this analysis shows association rather than direction, both VMP1-to-partner and partner-to-VMP1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, VMP1 versus HSD17B4 in LARGE_INTESTINE, with a Pearson correlation of 0.68.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (VMP1→partner) and Y-score (partner→VMP1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LARGE_INTESTINE	HSD17B4 →	+1.344	+1.644	<.001	<.001	3	13
BLOOD_Lymphoma	SLC35A2 →	+0.767	+0.909	.005	.003	3	6
LIVER	TIGD2 →	+0.918	+1.395	<.001	<.001	3	6
CNS	C5orf15 →	+0.695	+0.673	.005	.003	3	5
CNS	GNS →	+1.051	+0.640	<.001	.006	3	5
LUNG_NSCLC_LUAD	GBP2 →	+1.567	+0.888	<.001	.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 4,175 associations by consensus.

VMP1 vs HSD17B4 — LARGE_INTESTINE

Explore this scatter interactively →