VGLL2

mutation — cross-omics
Cross-omicsMUTATION → IMMUNEPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, VGLL2 mutation is significantly associated with the immune_cell of many other genes, with 3 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible VGLL2-associated genes across cancer lineages are CLP, MEP, and Th2 cells. Each is linked with VGLL2 in more than 1 cancer types. Because this analysis shows association rather than direction, both VGLL2-to-partner and partner-to-VGLL2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CLP grouped by VGLL2-low versus VGLL2-high in UCEC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (VGLL2→partner) and Y-score (partner→VGLL2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCLP →-0.074-3.169.014.01931
UCECMEP →+0.043+2.202.001.03431
UCECTh2 cells →+0.266+3.177.002.01021
Each partner links to its Q-omics profile. Showing the 3 strongest of 3 associations by consensus.

CLP by VGLL2 expression — UCEC

Box plot of CLP in VGLL2-low vs VGLL2-high samples in UCEC.

Explore this box plot interactively →

Exploration