VCAN-AS1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, VCAN-AS1 RNA expression is significantly associated with the protein abundance of many other proteins, with 14,956 significant associations in total. BRCA shows the largest number of these associations.

The most reproducible VCAN-AS1-associated proteins across cancer lineages are SULF1, VCAN, and ANTXR1. Each is linked with VCAN-AS1 in more than 8 cancer types. Because this analysis shows association rather than direction, both VCAN-AS1-to-partner and partner-to-VCAN-AS1 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, VCAN-AS1 versus SULF1 in LSCC, with a Pearson correlation of 0.57.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (VCAN-AS1→partner) and Y-score (partner→VCAN-AS1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCSULF1 →+1.009+1.300<.001<.00139
LSCCVCAN →+1.052+1.478<.001<.00139
COADANTXR1 →+0.801+0.717<.001<.00139
OVMRC2 →+0.788+1.044<.001<.00139
CCRCCMXRA5 →+0.795+1.047<.001.00138
OVNNMT →+1.398+1.019<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest of 14,956 associations by consensus.

VCAN-AS1 vs SULF1 — LSCC

Per-sample scatter of VCAN-AS1 vs SULF1 in LSCC (Pearson r = 0.57).

Explore this scatter interactively →

Exploration