VAV3-AS1

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, VAV3-AS1 RNA differs between tumor and matched normal tissue in 8 of 18 cancer types tested, making tumor–normal expression one of VAV3-AS1’s most consistent transcriptional readouts.

The strongest signal is observed in lung squamous cell carcinoma (LUSC), where VAV3-AS1 RNA is repressed in tumor relative to normal tissue. In most cancer types VAV3-AS1 is over-expressed in tumor, although a few such as LUSC and KICH show the opposite, repressed pattern.

LUSC, BRCA, and KICH are the cancer types where VAV3-AS1 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in VAV3-AS1 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
LUSCAllII,III,IV−0.217<.0017view →
BRCAAllAll+0.321<.0016view →
KICHAllAll−0.176<.0015view →
BLCAAllAll−0.138.0233view →
KIRCMaleAll−0.059.0243view →
THCAMaleAll−0.476.0021view →
ESCAAllAll−0.195.0411view →
COADFemaleAll−0.075.0371view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 8 strongest of 8 lineages.

VAV3-AS1–LUSC

Tumor-vs-normal expression box plot for VAV3-AS1 RNA in LUSC.

Open the LUSC breakdown →

Exploration