USP12

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, USP12 RNA expression is significantly associated with the protein abundance of many other proteins, with 11,867 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible USP12-associated proteins across cancer lineages are HSPH1, RPL6, and RPL7. Each is linked with USP12 in more than 3 cancer types. Because this analysis shows association rather than direction, both USP12-to-partner and partner-to-USP12 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, USP12 versus HSPH1 in COAD, with a Pearson correlation of 0.34.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (USP12→partner) and Y-score (partner→USP12) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
COADHSPH1 →+0.577+0.482<.001.00234
LUADRPL6 →-0.377-0.326.002.00234
LUADRPL7 →-0.214-0.345.001<.00134
BRCAHMGB1 →+0.429+0.581<.001<.00134
BRCAARHGEF7 →+0.262+0.488<.001.00534
OVTBC1D9B_S442 →+1.002+0.337<.001.00133
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,867 associations by consensus.

USP12 vs HSPH1 — COAD

Per-sample scatter of USP12 vs HSPH1 in COAD (Pearson r = 0.34).

Explore this scatter interactively →

Exploration