USP12-AS2

RNA — tumor vs normal
Tumor vs NormalRNABox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, USP12-AS2 RNA differs between tumor and matched normal tissue in 8 of 18 cancer types tested, making tumor–normal expression one of USP12-AS2’s most consistent transcriptional readouts.

The strongest signal is observed in kidney chromophobe (KICH), where USP12-AS2 RNA is repressed in tumor relative to normal tissue. In most cancer types USP12-AS2 is over-expressed in tumor, although a few such as KICH and KIRP show the opposite, repressed pattern.

KICH, KIRP, and KIRC are the cancer types where USP12-AS2 tumor–normal differential expression is most reproducible.

RNA tumor vs normal associations by lineage

Ranked by sampling consensus. Fold-change is the tumor-versus-normal difference in USP12-AS2 RNA (log2); positive values indicate higher expression in tumor. p-values are from the differential-expression test.
LineageGenderStageFold-changepSampling consensus
KICHMaleII,III,IV−1.470<.00110view →
KIRPAllAll−0.564<.0019view →
KIRCAllAll−0.415<.0015view →
LIHCMaleAll+0.623<.0013view →
UCECAllAll−0.578.0392view →
HNSCMaleIII,IV+0.431.0142view →
CHOLAllII,III,IV−0.340.0252view →
THCAAllAll−0.163.0211view →
Pink = over-expressed in tumor, green = repressed in tumor. Showing the 8 strongest of 8 lineages.

USP12-AS2–KICH

Tumor-vs-normal expression box plot for USP12-AS2 RNA in KICH.

Open the KICH breakdown →

Exploration