USP11

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, USP11 mutation is significantly associated with the RNA expression of many other genes, with 238 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible USP11-associated genes across cancer lineages are GPR26, C10orf71, and SLC32A1. Each is linked with USP11 in more than 1 cancer types. Because this analysis shows association rather than direction, both USP11-to-partner and partner-to-USP11 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, GPR26 grouped by USP11-low versus USP11-high in OESOPHAGUS.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (USP11→partner) and Y-score (partner→USP11) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OESOPHAGUSGPR26 →+0.036+4.906<.001.00631
OESOPHAGUSC10orf71 →+0.006+4.906<.001.00631
BLOOD_LeukemiaSLC32A1 →+1.243+3.901<.001.00631
BLOOD_LeukemiaGML →+0.060+4.567.001.00131
BLOOD_LeukemiaMMP27 →+0.015+4.384<.001.00631
BLOOD_LeukemiaAWAT2 →+0.012+3.705<.001.00731
Each partner links to its Q-omics profile. Showing the 6 strongest of 238 associations by consensus.

GPR26 by USP11 expression — OESOPHAGUS

Box plot of GPR26 in USP11-low vs USP11-high samples in OESOPHAGUS.

Explore this box plot interactively →

Exploration