USH2A-AS2

Across TCGA patient cohorts, USH2A-AS2 RNA expression is significantly associated with the go_rna of many other GO terms, with 5,859 significant associations in total. STAD shows the largest number of these associations.

The most reproducible USH2A-AS2-associated GO terms across cancer lineages are Vesicle localization, Protein localization to mitochondrion, and Intrinsic apoptotic signaling pathway by p53 class mediator. Each is linked with USH2A-AS2 in more than 4 cancer types. Because this analysis shows association rather than direction, both USH2A-AS2-to-partner and partner-to-USH2A-AS2 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Vesicle localization grouped by USH2A-AS2-low versus USH2A-AS2-high in STAD.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (USH2A-AS2→partner) and Y-score (partner→USH2A-AS2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
STAD	Vesicle localization →	+0.131	+0.045	<.001	<.001	3	5
STAD	Protein localization to mitochondrion →	+0.151	+0.043	<.001	<.001	3	5
STAD	Intrinsic apoptotic signaling pathway by p53 class mediator →	+0.141	+0.040	<.001	<.001	3	5
STAD	Aerobic respiration →	+0.182	+0.047	<.001	<.001	3	5
STAD	Glial cell differentiation →	+0.100	+0.046	<.001	<.001	3	5
STAD	Telencephalon development →	+0.091	+0.045	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest of 5,859 associations by consensus.

Vesicle localization by USH2A-AS2 expression — STAD

Explore this box plot interactively →